BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H06SP1|AL426601
(836 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1764 1632 0.0
>3x_Contig1764
Length = 22510
Score = 1632 bits (822), Expect = 0.0
Identities = 833/837 (99%), Gaps = 1/837 (0%)
Strand = Plus / Minus
Query: 1 gatcatatttttgtctgtggtaaacttacaggactccgagagatttcaatttcgtaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 gatcatatttttgtctgtggtaaacttacaggactccgagagatttcaatttcgtaccct 1323
Query: 61 tttagttactcaccgataaataacagataagataaaatgagcaaagaatgtactgtatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 tttagttactcaccgataaataacagataagataaaatgagcaaagaatgtactgtatca 1263
Query: 121 tatacagcctcaatcaggctgaatacaatgcactagtgtaaacaaagtttctggcccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 tatacagcctcaatcaggctgaatacaatgcactagtgtaaacaaagtttctggcccctt 1203
Query: 181 actgaacactaacgctagtcagttgcgacggatcattcaattctcattggatcagttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 actgaacactaacgctagtcagttgcgacggatcattcaattctcattggatcagttttc 1143
Query: 241 tttgtttactattttgagatcgaatcctcaactgctatacttttcagcgaaaaaccttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 tttgtttactattttgagatcgaatcctcaactgctatacttttcagcgaaaaaccttta 1083
Query: 301 aaaatcaaagcaaacaacaaacaaatacaccacaaccctgaagaatgccgatatatttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 aaaatcaaagcaaacaacaaacaaatacaccacaaccctgaagaatgccgatatatttat 1023
Query: 361 wattgcatatttagcacgcatatctgcagtgagtgatctttgggtttatctttattaggt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 aattgcatatttagcacgcatatctgcagtgagtgatctttgggtttatctttattaggt 963
Query: 421 aaagaagtattagttgctctcagattcaaacttccaactactttaagagtccgtctgcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aaagaagtattagttgctctcagattcaaacttccaactactttaagagtccgtctgcca 903
Query: 481 ttgagttgcgtgttgtattgagggttataggtttttgaattctttatttcgcattacttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ttgagttgcgtgttgtattgagggttataggtttttgaattctttatttcgcattacttg 843
Query: 541 agaacttcgaaaagttctttatttacgaggactgaaactaatctgattgctaagccaacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 agaacttcgaaaagttctttatttacgaggactgaaactaatctgattgctaagccaacc 783
Query: 601 acagacctggaagcaatgtctcaagatccgttacataattttnaggttcagttcgaaaaa 660
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 782 acagacctggaagcaatgtctcaagatccgttacataattttaaggttcagttcgaaaaa 723
Query: 661 tttgtggctagcaaccctaatgtttcttccgtgacatcttctgcctcgaggatccctgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttgtggctagcaaccctaatgtttcttccgtgacatcttctgcctcgaggatccctgaa 663
Query: 721 tcatctaaagccgtaatagttttatcaccatattctttatcacatcagttcccccgttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcatctaaagccgtaatagttttatcaccatattctttatcacatcagttcccccgttat 603
Query: 781 tgggtat-cmagtcatacaaaaaaactattgtagaaagaccagagagattattagca 836
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgggtatccaagtcatacaaaaaaactattgtagaaagaccagagagattattagca 546
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6296
Number of Sequences: 1807
Number of extensions: 6296
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 836
length of database: 10,358,551
effective HSP length: 16
effective length of query: 820
effective length of database: 10,329,639
effective search space: 8470303980
effective search space used: 8470303980
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)